Transcript: SLCO5A1-004 OTTHUMT00000381991.1

Description

solute carrier organic anion transporter family, member 5A1

Location

Chromosome 8: 69,672,343-69,833,390 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 30 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000165121 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SLCO5A1-001	OTTHUMT00000381990.3	9076	848aa	OTTHUMP00000228515	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6205	Q9H2Y9
SLCO5A1-004	OTTHUMT00000381991.1	3725	687aa	OTTHUMP00000228516	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55243	-
SLCO5A1-006	OTTHUMT00000381993.1	2630	793aa	OTTHUMP00000228518	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55242	-
SLCO5A1-005	OTTHUMT00000381992.1	2650	312aa	OTTHUMP00000228517	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PPI0
SLCO5A1-002	OTTHUMT00000381995.1	1777	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLCO5A1-008	OTTHUMT00000381999.1	610	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLCO5A1-007	OTTHUMT00000381998.1	582	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLCO5A1-003	OTTHUMT00000381994.1	2261	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 3,725 bps Translation length: 687 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS55243

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 16/04/2010)

Alternative symbols

RP11-347D13.1-004

Other assemblies

This transcript maps to 69,672,343-69,833,390 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000524945

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SLCO5A1-004 OTTHUMT00000381991.1

Summary

Transcript-based displays