Transcript: GTF2F1-006 OTTHUMT00000398036.2

Description

general transcription factor IIF, polypeptide 1, 74kDa

Location

Chromosome 19: 6,379,878-6,391,952 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000168087 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GTF2F1-001	OTTHUMT00000398033.1	2731	517aa	OTTHUMP00000237859	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12165	P35269
GTF2F1-006	OTTHUMT00000398036.2	1705	433aa	OTTHUMP00000237861	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0QXD6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
GTF2F1-005	OTTHUMT00000398035.2	1382	381aa	OTTHUMP00000237860	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0R0R9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GTF2F1-003	OTTHUMT00000398037.2	568	127aa	OTTHUMP00000237862	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0R0Z3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GTF2F1-002	OTTHUMT00000398034.1	1729	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
GTF2F1-008	OTTHUMT00000453039.1	1002	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
GTF2F1-007	OTTHUMT00000453040.1	762	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,705 bps Translation length: 433 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 13/10/2010)

Alternative symbols

CTB-180A7.1-006

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 6,379,878-6,391,952 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000593678

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: GTF2F1-006 OTTHUMT00000398036.2

Summary

Transcript-based displays