HumanVega Home
Description

sodium channel, voltage gated, type VIII, alpha subunit

Location
About this transcript

This transcript has 16 exons and is annotated with 12 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SCN8A-001OTTHUMT00000404372.5115561980aaOTTHUMP00000241297
 
Protein coding
CCDS44891Q9UQD0
SCN8A-008OTTHUMT00000481600.159431980aaOTTHUMP00000278454
 
Protein coding
CCDS81692-
SCN8A-005OTTHUMT00000404373.358201939aaOTTHUMP00000241298
 
Protein coding
CCDS53794-
SCN8A-007OTTHUMT00000481599.359761991aaOTTHUMP00000278453
 
Protein coding
--
SCN8A-014OTTHUMT00000492665.13359759aaOTTHUMP00000283988
 
Protein coding
--
SCN8A-004OTTHUMT00000404374.31627542aaOTTHUMP00000241299
 
Protein coding
-F8W0Q0 CDS 5' and 3' incomplete
SCN8A-002OTTHUMT00000404370.44651aaOTTHUMP00000278452
 
Protein coding
--CDS 3' incomplete
SCN8A-011OTTHUMT00000490200.23578320aaOTTHUMP00000282564
 
Nonsense mediated decay
-A0A1B0GVM8 CDS 5' incomplete
SCN8A-010OTTHUMT00000490199.22489243aaOTTHUMP00000282563
 
Nonsense mediated decay
-A0A1B0GVD4
SCN8A-006OTTHUMT00000404375.21966No protein-
 
Processed transcript
--
SCN8A-012OTTHUMT00000490201.1100No protein-
 
Processed transcript
--
SCN8A-013OTTHUMT00000490202.193No protein-
 
Processed transcript
--
SCN8A-003OTTHUMT00000404371.13253No protein-
 
Retained intron
--
SCN8A-009OTTHUMT00000481601.1506No protein-
 
Retained intron
--
Statistics

Exons: 16 Transcript length: 3,578 bps Translation length: 320 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 30/03/2016 (Created on 10/02/2016)

Alternative symbols

RP11-923I11.2-011

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 51,745,901-51,807,000 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays