Transcript: PRDM4-001 OTTHUMT00000406546.1

Description

PR domain containing 4

Location

About this transcript

This transcript has 12 exons and is annotated with 38 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRDM4-001	OTTHUMT00000406546.1	4210	801aa	OTTHUMP00000242462	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9115	Q9UKN5
PRDM4-005	OTTHUMT00000406549.2	837	279aa	OTTHUMP00000242464	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PRDM4-004	OTTHUMT00000406551.2	640	75aa	OTTHUMP00000242465	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PRDM4-002	OTTHUMT00000406547.1	2591	316aa	OTTHUMP00000242463	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PRDM4-003	OTTHUMT00000406550.1	585	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PRDM4-006	OTTHUMT00000406548.1	568	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 4,210 bps Translation length: 801 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9115

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 28/01/2011)

Alternative symbols

RP11-864J10.3-001

Other assemblies

This transcript maps to 107,732,866-107,761,160 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000228437

Curation Method

Manual annotation from Havana