Transcript: CHGA-004 OTTHUMT00000412412.1

Description

chromogranin A (parathyroid secretory protein 1)

Location

About this transcript

This transcript has 5 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
CHGA-001	OTTHUMT00000412411.1	2063	457aa	OTTHUMP00000245492	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9906	P10645
CHGA-003	OTTHUMT00000412414.1	1474	306aa	OTTHUMP00000245495	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76718	G5E968
CHGA-002	OTTHUMT00000412413.2	1922	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CHGA-004	OTTHUMT00000412412.1	896	38aa	OTTHUMP00000245493	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CHGA-005	OTTHUMT00000412415.1	889	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CHGA-007	OTTHUMT00000412417.1	912	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CHGA-006	OTTHUMT00000412416.1	638	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 896 bps Translation length: 38 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 01/04/2011)

Alternative symbols

RP11-862G15.3-004

Other assemblies

This transcript maps to 92,923,157-92,931,681 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000556076

Curation Method

Manual annotation from Havana