Transcript: ALKBH1-002 OTTHUMT00000414038.1

Description

alkB, alkylation repair homolog 1 (E. coli)

Location

About this transcript

This transcript has 5 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ALKBH1-001	OTTHUMT00000414037.1	2594	389aa	OTTHUMP00000246383	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32127	Q13686
ALKBH1-002	OTTHUMT00000414038.1	1750	116aa	OTTHUMP00000246384	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3V4M4
ALKBH1-003	OTTHUMT00000414039.1	649	112aa	OTTHUMP00000246385	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YJF3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ALKBH1-004	OTTHUMT00000414040.1	497	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,750 bps Translation length: 116 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 28/04/2011)

Alternative symbols

CTD-2175M1.2-002

Other assemblies

This transcript maps to 77,673,075-77,708,010 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000557057

Curation Method

Manual annotation from Havana