Transcript: ERN2-006 OTTHUMT00000434888.3

Description

endoplasmic reticulum to nucleus signaling 2

Location

Chromosome 16: 23,690,638-23,694,760 reverse strand.

About this transcript

This transcript has 5 exons.

Gene

This transcript is a product of gene OTTHUMG00000177020 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ERN2-001	OTTHUMT00000434887.2	3549	926aa	OTTHUMP00000255642	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32407	Q76MJ5
ERN2-002	OTTHUMT00000434886.1	3169	874aa	OTTHUMP00000255641	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76845	E7ETG2
ERN2-003	OTTHUMT00000434890.2	2263	129aa	OTTHUMP00000255643	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ERN2-004	OTTHUMT00000434891.1	980	80aa	OTTHUMP00000255644	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ERN2-006	OTTHUMT00000434888.3	759	23aa	OTTHUMP00000256262	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERN2-008	OTTHUMT00000435297.1	412	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ERN2-007	OTTHUMT00000435296.1	313	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 759 bps Translation length: 23 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 16/04/2014 (Created on 22/09/2011)

Alternative symbols

CTD-2196E14.1-006

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 23,690,638-23,694,760 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000562458

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: ERN2-006 OTTHUMT00000434888.3

Summary

Transcript-based displays