Transcript: PRKCA-003 OTTHUMT00000446977.1

Description

protein kinase C, alpha

Location

About this transcript

This transcript has 15 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRKCA-002	OTTHUMT00000446976.1	8751	672aa	OTTHUMP00000261776	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11664	P17252
PRKCA-003	OTTHUMT00000446977.1	2718	150aa	OTTHUMP00000261777	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3KN97	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PRKCA-001	OTTHUMT00000446950.2	1733	308aa	OTTHUMP00000261775	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3KRN5
PRKCA-005	OTTHUMT00000446975.1	519	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PRKCA-004	OTTHUMT00000446978.1	321	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 2,718 bps Translation length: 150 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 29/02/2012)

Alternative symbols

RP11-4F22.1-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 66,302,860-66,775,127 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000284384

Curation Method

Manual annotation from Havana