Transcript: SSC5D-001 OTTHUMT00000453345.2

Description

scavenger receptor cysteine rich domain containing (5 domains)

Location

About this transcript

This transcript has 14 exons and is annotated with 62 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SSC5D-001	OTTHUMT00000453345.2	4845	1573aa	OTTHUMP00000265509	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46196	A1L4H1
SSC5D-003	OTTHUMT00000453344.1	3017	951aa	OTTHUMP00000265508	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS59424	-
SSC5D-005	OTTHUMT00000466674.2	457	90aa	OTTHUMP00000271704	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0QZ17	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SSC5D-004	OTTHUMT00000453346.3	354	118aa	OTTHUMP00000265510	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SSC5D-002	OTTHUMT00000453343.1	3085	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 4,845 bps Translation length: 1,573 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS46196

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 09/05/2012)

Alternative symbols

CTD-2537I9.3-001

Other assemblies

This transcript maps to 55,488,567-55,519,098 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000389623

Curation Method

Manual annotation from Havana