Transcript: SMAGP-002 OTTHUMT00000469791.1

Description

small cell adhesion glycoprotein

Location

About this transcript

This transcript has 4 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMAGP-001	OTTHUMT00000469789.1	2350	97aa	OTTHUMP00000273047	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44889	Q0VAQ4
SMAGP-003	OTTHUMT00000469792.1	1518	97aa	OTTHUMP00000273050	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44889	Q0VAQ4
SMAGP-002	OTTHUMT00000469791.1	1062	97aa	OTTHUMP00000273049	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44889	Q0VAQ4
SMAGP-006	OTTHUMT00000469795.1	816	42aa	OTTHUMP00000273053	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SMAGP-004	OTTHUMT00000469794.2	610	50aa	OTTHUMP00000273052	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	S4R3E1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SMAGP-008	OTTHUMT00000469793.1	577	83aa	OTTHUMP00000273051	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	S4R466
SMAGP-005	OTTHUMT00000469796.1	433	42aa	OTTHUMP00000273054	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SMAGP-007	OTTHUMT00000469790.1	1045	37aa	OTTHUMP00000273048	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-

Summary

Statistics

Exons: 4 Transcript length: 1,062 bps Translation length: 97 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS44889

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 30/01/2013)

Alternative symbols

RP11-454E5.3-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 51,245,351-51,270,198 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000398453

Curation Method

Manual annotation from Havana