Description
sphingomyelin phosphodiesterase 4
Location
Chromosome 16: 17,619,354-17,644,828 forward strand.
About this gene
This gene has 23 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Smpd4-001 | OTTMUST00000091495.1 | 4623 | 823aa | OTTMUSP00000050401 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS28009 | Q6ZPR5 | |
Smpd4-004 | OTTMUST00000091498.1 | 4565 | 807aa | OTTMUSP00000050403 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49780 | - | |
Smpd4-002 | OTTMUST00000091496.1 | 4532 | 794aa | OTTMUSP00000050402 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49781 | - | |
Smpd4-003 | OTTMUST00000091524.1 | 3046 | 793aa | OTTMUSP00000050421 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49779 | - | |
Smpd4-009 | OTTMUST00000091504.1 | 2256 | 751aa | OTTMUSP00000050408 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q914 | |
Smpd4-014 | OTTMUST00000091530.1 | 2166 | 721aa | OTTMUSP00000050426 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q1V5 | |
Smpd4-011 | OTTMUST00000091505.1 | 1722 | 573aa | OTTMUSP00000050409 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q9L1 | |
Smpd4-007 | OTTMUST00000091501.3 | 1619 | 499aa | OTTMUSP00000050405 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q0L7 | |
Smpd4-021 | OTTMUST00000091527.1 | 516 | 117aa | OTTMUSP00000050423 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q146 | |
Smpd4-019 | OTTMUST00000091521.3 | 509 | 128aa | OTTMUSP00000050418 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PZU7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Smpd4-008 | OTTMUST00000091523.2 | 497 | 125aa | OTTMUSP00000050420 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q1T4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Smpd4-015 | OTTMUST00000091528.2 | 472 | 110aa | OTTMUSP00000050424 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PVE5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Smpd4-018 | OTTMUST00000091526.2 | 460 | 82aa | OTTMUSP00000050422 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q5Z0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Smpd4-016 | OTTMUST00000091529.2 | 270 | 27aa | OTTMUSP00000050425 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9QAA5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Smpd4-012 | OTTMUST00000091503.2 | 2329 | 50aa | OTTMUSP00000050407 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9Q1M2 | |
Smpd4-010 | OTTMUST00000091502.2 | 921 | 92aa | OTTMUSP00000050406 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9Q5R0 | |
Smpd4-013 | OTTMUST00000091506.4 | 918 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Smpd4-006 | OTTMUST00000091500.1 | 5017 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smpd4-023 | OTTMUST00000091497.1 | 2915 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smpd4-005 | OTTMUST00000091499.1 | 2446 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smpd4-022 | OTTMUST00000091531.1 | 874 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smpd4-020 | OTTMUST00000091532.1 | 793 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smpd4-017 | OTTMUST00000091525.1 | 626 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |