Description
whirlin
Location
Chromosome 4: 63,414,910-63,495,991 reverse strand.
About this gene
This gene has 17 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Whrn-005 | OTTMUST00000042551.1 | 4049 | 918aa | OTTMUSP00000019122 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS18255 | Q80VW5 | |
| Whrn-004 | OTTMUST00000042550.1 | 4028 | 911aa | OTTMUSP00000019121 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38778 | - | |
| Whrn-001 | OTTMUST00000000708.2 | 4016 | 907aa | OTTMUSP00000000316 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS18257 | - | |
| Whrn-002 | OTTMUST00000000709.1 | 4013 | 906aa | OTTMUSP00000000317 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS18256 | Q80VW5 | |
| Whrn-017 | OTTMUST00000042566.1 | 2804 | 571aa | OTTMUSP00000019129 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Whrn-006 | OTTMUST00000042552.4 | 2665 | 476aa | OTTMUSP00000037185 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Whrn-007 | OTTMUST00000042553.3 | 2632 | 465aa | OTTMUSP00000037186 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Whrn-008 | OTTMUST00000042554.4 | 2419 | 404aa | OTTMUSP00000037187 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Whrn-014 | OTTMUST00000042560.3 | 797 | 164aa | OTTMUSP00000037189 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I7HNW6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Whrn-016 | OTTMUST00000042565.2 | 590 | 74aa | OTTMUSP00000037190 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6RBK9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Whrn-012 | OTTMUST00000042558.2 | 323 | 28aa | OTTMUSP00000037188 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F7BB17 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Whrn-011 | OTTMUST00000042557.2 | 2741 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Whrn-003 | OTTMUST00000000710.2 | 510 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Whrn-010 | OTTMUST00000042556.2 | 2869 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Whrn-009 | OTTMUST00000042555.3 | 2537 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Whrn-015 | OTTMUST00000042561.1 | 872 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Whrn-013 | OTTMUST00000042559.1 | 783 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
