Description
sodium channel voltage-gated type II alpha 1
Location
Chromosome 2: 65,620,771-65,767,447 forward strand.
About this gene
This gene has 8 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Scn2a1-001 | OTTMUST00000031206.2 | 8935 | 2006aa | OTTMUSP00000013961 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38130 | B1AWN6 | |
| Scn2a1-002 | OTTMUST00000031207.3 | 6348 | 2006aa | OTTMUSP00000013962 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0J9YTW6 | |
| Scn2a1-004 | OTTMUST00000137596.2 | 1810 | 504aa | OTTMUSP00000072446 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F7AMU5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Scn2a1-007 | OTTMUST00000137599.1 | 576 | 106aa | OTTMUSP00000072447 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A9JQD3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Scn2a1-008 | OTTMUST00000137600.1 | 513 | 99aa | OTTMUSP00000072448 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0J9YTX0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Scn2a1-005 | OTTMUST00000137597.1 | 2454 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Scn2a1-006 | OTTMUST00000137598.1 | 1482 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Scn2a1-003 | OTTMUST00000031208.1 | 698 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
