This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: Scn9a OTTMUSG00000013103

.

Description

sodium channel voltage-gated type IX alpha

Location

Chromosome 2: 66,480,080-66,634,962 reverse strand.

About this gene

This gene has 4 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Scn9a-001	OTTMUST00000031622.1	9840	1984aa	OTTMUSP00000014089	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS71063	Q62205
Scn9a-002	OTTMUST00000031623.2	6471	1973aa	OTTMUSP00000014090	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B1AYL0
Scn9a-003	OTTMUST00000031624.2	3642	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Scn9a-004	OTTMUST00000031625.1	762	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays