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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
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Gene: Hnf1a OTTMUSG00000014612

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Description

HNF1 homeobox A

Location

Chromosome 5: 114,948,980-114,971,094 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 3 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hnf1a-001	OTTMUST00000034659.3	3191	628aa	OTTMUSP00000015521	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19577	P22361
Hnf1a-003	OTTMUST00000104004.2	1687	119aa	OTTMUSP00000058156	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BKV2
Hnf1a-002	OTTMUST00000104007.1	1256	247aa	OTTMUSP00000058158	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BL72
Hnf1a-004	OTTMUST00000117109.1	2390	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays