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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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External references
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Gene: Lhx9 OTTMUSG00000022572

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Description

LIM homeobox protein 9

Location

Chromosome 1: 138,825,186-138,848,577 reverse strand.

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lhx9-002	OTTMUST00000054113.1	4937	330aa	OTTMUSP00000025781	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15334	-
Lhx9-004	OTTMUST00000054114.4	4633	321aa	OTTMUSP00000057741	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15333	-
Lhx9-005	OTTMUST00000054115.2	2065	397aa	OTTMUSP00000025782	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35726	Q9WUH2
Lhx9-001	OTTMUST00000054112.3	3645	388aa	OTTMUSP00000025780	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Lhx9-006	OTTMUST00000117050.2	1182	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Lhx9-007	OTTMUST00000128255.1	1058	75aa	OTTMUSP00000069019	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Lhx9-003	OTTMUST00000127022.1	1946	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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