Description
partner and localizer of BRCA2
Location
Chromosome 7: 122,107,262-122,132,985 reverse strand.
About this gene
This gene has 9 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Palb2-001 | OTTMUST00000054269.1 | 3750 | 1104aa | OTTMUSP00000025884 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS40117 | Q3U0P1 | |
| Palb2-004 | OTTMUST00000054272.1 | 3304 | 1030aa | OTTMUSP00000025887 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS80797 | D3YVU6 | |
| Palb2-002 | OTTMUST00000054270.1 | 2559 | 741aa | OTTMUSP00000025885 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS72035 | - | |
| Palb2-003 | OTTMUST00000054271.1 | 1553 | 384aa | OTTMUSP00000025886 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS80796 | - | |
| Palb2-005 | OTTMUST00000054273.3 | 3181 | 38aa | OTTMUSP00000030962 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RDD1 | |
| Palb2-007 | OTTMUST00000084850.2 | 1350 | 18aa | OTTMUSP00000045776 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F6VTV6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Palb2-006 | OTTMUST00000054274.5 | 3216 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Palb2-009 | OTTMUST00000142666.1 | 2145 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Palb2-008 | OTTMUST00000084920.1 | 709 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
