Description
GTF2I repeat domain containing 2
Location
Chromosome 5: 134,184,019-134,224,355 forward strand.
About this gene
This gene has 8 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Gtf2ird2-001 | OTTMUST00000060213.3 | 3482 | 936aa | OTTMUSP00000029363 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS19719 | Q99NI3 | |
| Gtf2ird2-005 | OTTMUST00000060217.2 | 693 | 45aa | OTTMUSP00000039181 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F7BET1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Gtf2ird2-004 | OTTMUST00000060216.1 | 618 | 34aa | OTTMUSP00000029365 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6XRH9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Gtf2ird2-006 | OTTMUST00000060211.1 | 3922 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Gtf2ird2-007 | OTTMUST00000060212.1 | 3234 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Gtf2ird2-002 | OTTMUST00000060214.2 | 3377 | 41aa | OTTMUSP00000029364 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RI26 | |
| Gtf2ird2-008 | OTTMUST00000137776.1 | 628 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Gtf2ird2-003 | OTTMUST00000060215.1 | 688 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
