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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (1)
- Orthologues (4)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

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Gene: Hdgf OTTMUSG00000027208

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Description

hepatoma-derived growth factor

Location

Chromosome 3: 87,906,321-87,916,132 forward strand.

About this gene

This gene has 6 transcripts (splice variants), 4 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hdgf-001	OTTMUST00000067279.1	2245	237aa	OTTMUSP00000033822	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17457	P51859
Hdgf-002	OTTMUST00000067280.3	933	202aa	OTTMUSP00000033823	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CXA0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hdgf-003	OTTMUST00000067281.1	763	84aa	OTTMUSP00000033824	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CYW7
Hdgf-005	OTTMUST00000067283.1	377	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Hdgf-004	OTTMUST00000067282.1	365	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Hdgf-006	OTTMUST00000067284.1	582	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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