Description
synaptojanin 1
Location
Chromosome 16: 90,936,092-91,011,308 reverse strand.
About this gene
This gene has 9 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Synj1-002 | OTTMUST00000069191.4 | 7090 | 1607aa | OTTMUSP00000035111 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49907 | D3Z656 | |
| Synj1-003 | OTTMUST00000069192.3 | 4771 | 1324aa | OTTMUSP00000035112 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q7S0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Synj1-011 | OTTMUST00000084944.1 | 3501 | 189aa | OTTMUSP00000045830 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Synj1-010 | OTTMUST00000084748.2 | 2189 | 693aa | OTTMUSP00000045711 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3Z1M7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Synj1-009 | OTTMUST00000084747.1 | 547 | 103aa | OTTMUSP00000045710 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Synj1-005 | OTTMUST00000070234.2 | 354 | 118aa | OTTMUSP00000035759 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Synj1-006 | OTTMUST00000071616.1 | 772 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Synj1-001 | OTTMUST00000069190.2 | 2743 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Synj1-004 | OTTMUST00000070233.1 | 947 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
