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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: Cyp2c40 OTTMUSG00000028294

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Description

cytochrome P450, family 2, subfamily c, polypeptide 40

Location

Chromosome 19: 39,767,071-39,812,814 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 6 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cyp2c40-001	OTTMUST00000070108.3	1803	520aa	OTTMUSP00000035692	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29798	P56657
Cyp2c40-004	OTTMUST00000088801.2	382	120aa	OTTMUSP00000048445	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CXY8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cyp2c40-002	OTTMUST00000088799.1	1638	194aa	OTTMUSP00000048444	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CYU2
Cyp2c40-003	OTTMUST00000088800.1	693	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cyp2c40-005	OTTMUST00000088802.1	347	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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