This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: Afg3l1 OTTMUSG00000031059

.

Description

AFG3(ATPase family gene 3)-like 1 (yeast)

Location

Chromosome 8: 123,477,903-123,503,916 forward strand.

About this gene

This gene has 6 transcripts (splice variants), 13 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Afg3l1-001	OTTMUST00000076944.2	4227	789aa	OTTMUSP00000040571	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22760	Q920A7
Afg3l1-002	OTTMUST00000076945.1	4111	584aa	OTTMUSP00000040572	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Afg3l1-005	OTTMUST00000076948.1	674	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Afg3l1-004	OTTMUST00000076947.1	648	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Afg3l1-006	OTTMUST00000076949.1	449	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Afg3l1-003	OTTMUST00000076946.1	419	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays