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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Gene expression
External references
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Gene: Cgnl1 OTTMUSG00000031674

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Description

cingulin-like 1

Location

Chromosome 9: 71,626,509-71,771,602 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cgnl1-001	OTTMUST00000078474.1	4487	1297aa	OTTMUSP00000041721	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23328	B2RSU6
Cgnl1-003	OTTMUST00000078476.1	6541	1226aa	OTTMUSP00000041722	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z3H4
Cgnl1-005	OTTMUST00000078478.1	416	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cgnl1-004	OTTMUST00000078477.1	946	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cgnl1-002	OTTMUST00000078475.1	771	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays