Description
sodium channel and clathrin linker 1
Location
Chromosome 3: 41,626,720-41,742,514 reverse strand.
About this gene
This gene has 10 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Sclt1-001 | OTTMUST00000084610.3 | 3005 | 688aa | OTTMUSP00000045621 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38425 | G5E861 | |
| Sclt1-003 | OTTMUST00000084611.1 | 2378 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Sclt1-010 | OTTMUST00000130525.1 | 1449 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Sclt1-002 | OTTMUST00000084606.1 | 2769 | 350aa | OTTMUSP00000045617 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Sclt1-004 | OTTMUST00000084612.1 | 2292 | 41aa | OTTMUSP00000045622 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6REI8 | |
| Sclt1-007 | OTTMUST00000084615.1 | 493 | 29aa | OTTMUSP00000045623 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F6X8R3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Sclt1-006 | OTTMUST00000084614.2 | 2865 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sclt1-005 | OTTMUST00000084613.2 | 2233 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sclt1-008 | OTTMUST00000130526.1 | 887 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sclt1-009 | OTTMUST00000084620.2 | 737 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
