Description
polypyrimidine tract binding protein 1
Location
Chromosome 10: 79,854,427-79,864,771 forward strand.
About this gene
This gene has 18 transcripts (splice variants) and 3 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Ptbp1-002 | OTTMUST00000090658.1 | 3169 | 529aa | OTTMUSP00000049772 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS35970 | Q8BGJ5 | |
| Ptbp1-001 | OTTMUST00000090655.1 | 3110 | 555aa | OTTMUSP00000049771 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS35969 | Q922I7 | |
| Ptbp1-005 | OTTMUST00000090666.1 | 2598 | 489aa | OTTMUSP00000049776 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS70064 | Q8CB58 | |
| Ptbp1-010 | OTTMUST00000090662.2 | 389 | 113aa | OTTMUSP00000049774 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Ptbp1-014 | OTTMUST00000090667.2 | 375 | 55aa | OTTMUSP00000049777 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q0W3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Ptbp1-015 | OTTMUST00000090668.2 | 319 | 107aa | OTTMUSP00000049778 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F7DCW4 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Ptbp1-007 | OTTMUST00000090663.1 | 2526 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Ptbp1-003 | OTTMUST00000090657.1 | 1819 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Ptbp1-008 | OTTMUST00000090661.1 | 1765 | 353aa | OTTMUSP00000049773 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9QMW9 | |
| Ptbp1-017 | OTTMUST00000090670.1 | 848 | 162aa | OTTMUSP00000049779 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F7AXP1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Ptbp1-012 | OTTMUST00000090665.1 | 385 | 62aa | OTTMUSP00000049775 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Ptbp1-009 | OTTMUST00000090660.1 | 657 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Ptbp1-011 | OTTMUST00000090664.1 | 369 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Ptbp1-004 | OTTMUST00000090659.1 | 2369 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ptbp1-006 | OTTMUST00000090672.1 | 2108 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ptbp1-013 | OTTMUST00000090656.1 | 950 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ptbp1-016 | OTTMUST00000090669.1 | 744 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ptbp1-018 | OTTMUST00000090671.1 | 693 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
