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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
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Gene: Pspc1 OTTMUSG00000035519

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Description

paraspeckle protein 1

Location

Chromosome 14: 56,722,441-56,778,316 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 4 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pspc1-001	OTTMUST00000090973.1	2383	523aa	OTTMUSP00000050049	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS27151	Q8R326
Pspc1-002	OTTMUST00000090974.1	2863	466aa	OTTMUSP00000050050	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Pspc1-003	OTTMUST00000090981.2	601	59aa	OTTMUSP00000050052	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7D909	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pspc1-004	OTTMUST00000090980.1	528	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays