Description
PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
Location
Chromosome 5: 147,430,161-147,548,502 forward strand.
About this gene
This gene has 23 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Pan3-001 | OTTMUST00000103965.2 | 5048 | 837aa | OTTMUSP00000058133 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS39401 | Q640Q5 | |
| Pan3-002 | OTTMUST00000103966.1 | 5541 | 887aa | OTTMUSP00000058134 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BKF3 | |
| Pan3-006 | OTTMUST00000103986.1 | 3486 | 458aa | OTTMUSP00000058152 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BLB9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pan3-003 | OTTMUST00000103968.2 | 2264 | 688aa | OTTMUSP00000058136 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BJH6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pan3-017 | OTTMUST00000103992.1 | 716 | 205aa | OTTMUSP00000058153 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pan3-019 | OTTMUST00000137905.2 | 468 | 156aa | OTTMUSP00000072559 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Pan3-005 | OTTMUST00000103969.1 | 4152 | 105aa | OTTMUSP00000058137 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pan3-004 | OTTMUST00000103967.2 | 2544 | 210aa | OTTMUSP00000058135 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pan3-009 | OTTMUST00000103982.1 | 1049 | 183aa | OTTMUSP00000058151 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pan3-015 | OTTMUST00000103991.1 | 468 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Pan3-018 | OTTMUST00000137904.1 | 451 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Pan3-014 | OTTMUST00000103989.1 | 322 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Pan3-011 | OTTMUST00000103984.1 | 305 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Pan3-022 | OTTMUST00000138086.1 | 3749 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-007 | OTTMUST00000103987.1 | 3207 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-021 | OTTMUST00000138085.1 | 2366 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-023 | OTTMUST00000138087.1 | 1899 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-012 | OTTMUST00000103985.2 | 792 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-013 | OTTMUST00000103988.1 | 712 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-020 | OTTMUST00000137906.1 | 671 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-010 | OTTMUST00000103983.1 | 600 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-008 | OTTMUST00000103981.1 | 522 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Pan3-016 | OTTMUST00000103990.1 | 468 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
