Description
synaptic Ras GTPase activating protein 1 homolog (rat)
Location
Chromosome 17: 26,941,253-26,972,434 forward strand.
About this gene
This gene has 10 transcripts (splice variants), 7 orthologues and 5 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Syngap1-001 | OTTMUST00000126931.2 | 6011 | 1340aa | OTTMUSP00000068605 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59625 | F6SEU4 | |
| Syngap1-005 | OTTMUST00000138006.3 | 5824 | 1282aa | OTTMUSP00000072609 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0J9YVH8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Syngap1-003 | OTTMUST00000126933.1 | 4315 | 1281aa | OTTMUSP00000068607 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A140T8K9 | |
| Syngap1-004 | OTTMUST00000138005.2 | 3921 | 1303aa | OTTMUSP00000072608 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0J9YUM2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Syngap1-002 | OTTMUST00000126932.2 | 4532 | 1281aa | OTTMUSP00000068606 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0A6YVS6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Syngap1-008 | OTTMUST00000138027.1 | 827 | 214aa | OTTMUSP00000072615 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0J9YUZ2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Syngap1-006 | OTTMUST00000138007.1 | 821 | 65aa | OTTMUSP00000072610 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0J9YUY7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Syngap1-010 | OTTMUST00000138028.1 | 700 | 117aa | OTTMUSP00000072616 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0J9YV63 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Syngap1-009 | OTTMUST00000138029.1 | 663 | 124aa | OTTMUSP00000072617 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0J9YUZ5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Syngap1-007 | OTTMUST00000138026.1 | 423 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
