Description
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
Location
Chromosome 3: 95,160,457-95,174,024 forward strand.
About this gene
This gene has 14 transcripts (splice variants), 12 orthologues and 11 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Sema6c-001 | OTTMUST00000053081.1 | 4029 | 963aa | OTTMUSP00000025221 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS71289 | E9Q613 | |
| Sema6c-004 | OTTMUST00000053084.1 | 3933 | 931aa | OTTMUSP00000025222 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS17604 | Q9WTM3 | |
| Sema6c-014 | OTTMUST00000132396.1 | 3553 | 963aa | OTTMUSP00000070593 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS71289 | E9Q613 | |
| Sema6c-006 | OTTMUST00000053086.1 | 3595 | 923aa | OTTMUSP00000025224 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G5E8N4 | |
| Sema6c-009 | OTTMUST00000053122.4 | 549 | 29aa | OTTMUSP00000070592 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Sema6c-002 | OTTMUST00000053082.2 | 3936 | 124aa | OTTMUSP00000065377 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Sema6c-015 | OTTMUST00000139842.2 | 3562 | 124aa | OTTMUSP00000073352 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Sema6c-010 | OTTMUST00000053123.2 | 716 | 80aa | OTTMUSP00000065376 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Sema6c-011 | OTTMUST00000053124.1 | 890 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Sema6c-008 | OTTMUST00000053121.1 | 450 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Sema6c-007 | OTTMUST00000053120.1 | 347 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Sema6c-003 | OTTMUST00000053083.2 | 5095 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sema6c-012 | OTTMUST00000053125.1 | 814 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sema6c-013 | OTTMUST00000053126.1 | 788 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
