Description
transient receptor potential cation channel, subfamily M, member 1
Location
Chromosome 7: 64,153,835-64,269,775 forward strand.
About this gene
This gene has 23 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Trpm1-003 | OTTMUST00000054159.2 | 5711 | 1622aa | OTTMUSP00000025808 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS21332 | Q2TV84 | |
| Trpm1-005 | OTTMUST00000054161.1 | 5493 | 1506aa | OTTMUSP00000025810 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RPV6 | |
| Trpm1-001 | OTTMUST00000054157.2 | 5076 | 1628aa | OTTMUSP00000025807 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQ32 | |
| Trpm1-008 | OTTMUST00000054164.1 | 2575 | 443aa | OTTMUSP00000025812 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Trpm1-009 | OTTMUST00000054165.2 | 2350 | 426aa | OTTMUSP00000025813 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Trpm1-004 | OTTMUST00000054160.1 | 2323 | 738aa | OTTMUSP00000025809 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Trpm1-016 | OTTMUST00000054172.3 | 795 | 153aa | OTTMUSP00000074258 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RPQ0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Trpm1-014 | OTTMUST00000054170.2 | 653 | 28aa | OTTMUSP00000025815 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQ58 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Trpm1-010 | OTTMUST00000054166.2 | 441 | 19aa | OTTMUSP00000025814 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Trpm1-019 | OTTMUST00000110479.2 | 346 | 20aa | OTTMUSP00000074242 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Trpm1-021 | OTTMUST00000110482.2 | 286 | 95aa | OTTMUSP00000061629 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQB3 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Trpm1-022 | OTTMUST00000110483.3 | 123 | 41aa | OTTMUSP00000074257 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Trpm1-020 | OTTMUST00000110480.2 | 343 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Trpm1-002 | OTTMUST00000054158.3 | 2007 | 461aa | OTTMUSP00000061628 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0U1RNU7 | |
| Trpm1-015 | OTTMUST00000054171.1 | 534 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Trpm1-013 | OTTMUST00000054169.2 | 372 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Trpm1-018 | OTTMUST00000110481.2 | 366 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Trpm1-023 | OTTMUST00000142240.1 | 3349 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Trpm1-012 | OTTMUST00000054168.1 | 3068 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Trpm1-007 | OTTMUST00000054163.3 | 2765 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Trpm1-006 | OTTMUST00000054162.2 | 1992 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Trpm1-017 | OTTMUST00000054173.2 | 722 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Trpm1-011 | OTTMUST00000054167.2 | 529 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
