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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
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Gene: Cpsf4 OTTMUSG00000023017

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Description

cleavage and polyadenylation specific factor 4

Location

Chromosome 5: 145,167,213-145,182,041 forward strand.

About this gene

This gene has 7 transcripts (splice variants), 3 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cpsf4-002	OTTMUST00000055443.1	1713	243aa	OTTMUSP00000026549	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS71711	B2LVG5
Cpsf4-001	OTTMUST00000055442.1	1606	211aa	OTTMUSP00000026548	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19859	Q8BQZ5
Cpsf4-003	OTTMUST00000055566.1	1387	244aa	OTTMUSP00000026621	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS71710	B2LVG6
Cpsf4-005	OTTMUST00000055568.1	1756	269aa	OTTMUSP00000026622	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CXT7
Cpsf4-007	OTTMUST00000055570.1	835	208aa	OTTMUSP00000026623	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7B6Z5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Cpsf4-004	OTTMUST00000055567.2	1204	62aa	OTTMUSP00000063272	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Cpsf4-006	OTTMUST00000055569.1	2971	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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