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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: Ssh1 OTTMUSG00000025799

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Description

slingshot homolog 1 (Drosophila)

Location

Chromosome 5: 113,937,094-113,993,894 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ssh1-001	OTTMUST00000063535.1	8436	1042aa	OTTMUSP00000031415	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19556	Q76I79
Ssh1-002	OTTMUST00000063587.1	5584	1020aa	OTTMUSP00000031447	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Ssh1-003	OTTMUST00000063588.1	3164	999aa	OTTMUSP00000031448	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8WHT2
Ssh1-005	OTTMUST00000063590.1	464	76aa	OTTMUSP00000031450	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7CBJ9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ssh1-004	OTTMUST00000063589.1	418	37aa	OTTMUSP00000031449	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Ssh1-006	OTTMUST00000063591.1	419	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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