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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: Smarcb1 OTTMUSG00000031849

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

Location

Chromosome 10: 75,896,769-75,921,617 reverse strand.

About this gene

This gene has 6 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Smarcb1-001	OTTMUST00000078972.1	1660	385aa	OTTMUSP00000042073	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23936	Q6ZWP4
Smarcb1-002	OTTMUST00000078973.1	1622	376aa	OTTMUSP00000042074	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48602	Q3UDA4
Smarcb1-005	OTTMUST00000078976.1	960	78aa	OTTMUSP00000042075	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RDC4
Smarcb1-006	OTTMUST00000078977.1	427	55aa	OTTMUSP00000042076	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6U415	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Smarcb1-003	OTTMUST00000078974.1	7441	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smarcb1-004	OTTMUST00000078975.1	3607	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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