Description
stromal antigen 1
Location
Chromosome 9: 100,597,798-100,959,375 forward strand.
About this gene
This gene has 18 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Stag1-001 | OTTMUST00000085912.1 | 6186 | 1258aa | OTTMUSP00000046456 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS23441 | Q9D3E6 | |
| Stag1-004 | OTTMUST00000085932.1 | 5909 | 1221aa | OTTMUSP00000046467 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Stag1-006 | OTTMUST00000085934.1 | 2885 | 869aa | OTTMUSP00000046469 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Stag1-002 | OTTMUST00000085930.2 | 1012 | 196aa | OTTMUSP00000046466 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Stag1-015 | OTTMUST00000085943.2 | 853 | 285aa | OTTMUSP00000046474 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Stag1-011 | OTTMUST00000085939.2 | 583 | 144aa | OTTMUSP00000046473 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Stag1-009 | OTTMUST00000085937.2 | 536 | 50aa | OTTMUSP00000046472 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Stag1-018 | OTTMUST00000124785.1 | 2238 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Stag1-008 | OTTMUST00000085936.1 | 4800 | 424aa | OTTMUSP00000046471 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Stag1-005 | OTTMUST00000085933.1 | 2637 | 306aa | OTTMUSP00000046468 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Stag1-007 | OTTMUST00000085935.1 | 1793 | 174aa | OTTMUSP00000046470 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Stag1-016 | OTTMUST00000085944.1 | 3857 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Stag1-017 | OTTMUST00000124786.1 | 3607 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Stag1-003 | OTTMUST00000085931.1 | 2022 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Stag1-013 | OTTMUST00000085941.1 | 692 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Stag1-014 | OTTMUST00000085942.1 | 596 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Stag1-010 | OTTMUST00000085938.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Stag1-012 | OTTMUST00000085940.1 | 558 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
