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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
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Gene: Sema3c OTTMUSG00000035305

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Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C

Location

Chromosome 5: 17,574,281-17,730,268 forward strand.

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sema3c-001	OTTMUST00000090077.3	5491	751aa	OTTMUSP00000049340	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19099	Q62181
Sema3c-005	OTTMUST00000090155.4	785	226aa	OTTMUSP00000049402	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q0Z0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sema3c-003	OTTMUST00000090135.14	1142	42aa	OTTMUSP00000049385	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PXL2
Sema3c-004	OTTMUST00000090136.3	4075	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sema3c-002	OTTMUST00000090134.1	1549	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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