This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: Pdlim1 OTTMUSG00000043391

.

Description

PDZ and LIM domain 1 (elfin)

Location

Chromosome 19: 40,221,173-40,271,842 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 5 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pdlim1-001	OTTMUST00000113837.1	2571	327aa	OTTMUSP00000063593	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37977	O70400
Pdlim1-003	OTTMUST00000113840.2	692	198aa	OTTMUSP00000063594	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	S4R1V0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pdlim1-002	OTTMUST00000113841.1	2835	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pdlim1-005	OTTMUST00000113838.1	715	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pdlim1-004	OTTMUST00000113839.1	666	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays