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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: Aplf OTTMUSG00000057210

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Description

aprataxin and PNKP like factor

Location

Chromosome 6: 87,628,424-87,672,193 reverse strand.

About this gene

This gene has 4 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Aplf-001	OTTMUST00000140846.1	3132	478aa	OTTMUSP00000073697	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20324	-
Aplf-002	OTTMUST00000140848.1	1889	499aa	OTTMUSP00000073699	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51839	Q9D842
Aplf-004	OTTMUST00000140847.1	1587	44aa	OTTMUSP00000073698	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SW39
Aplf-003	OTTMUST00000140849.1	3588	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays