Transcript: Snapc3-002 OTTMUST00000000100.2

Description

small nuclear RNA activating complex, polypeptide 3

Location

Chromosome 4: 83,417,744-83,454,033 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 1 domain and feature.

Gene

This transcript is a product of gene OTTMUSG00000000033 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Snapc3-006	OTTMUST00000000982.4	1405	407aa	OTTMUSP00000000436	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38792	Q9D2C9
Snapc3-003	OTTMUST00000000101.2	942	269aa	OTTMUSP00000000053	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Snapc3-005	OTTMUST00000000103.3	3897	407aa	OTTMUSP00000047136	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS38792	Q9D2C9
Snapc3-001	OTTMUST00000000099.3	2710	407aa	OTTMUSP00000047133	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS38792	Q9D2C9
Snapc3-004	OTTMUST00000000102.3	2617	407aa	OTTMUSP00000047135	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS38792	Q9D2C9
Snapc3-002	OTTMUST00000000100.2	1993	131aa	OTTMUSP00000047134	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Snapc3-009	OTTMUST00000086961.1	911	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Snapc3-008	OTTMUST00000086960.1	395	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Snapc3-007	OTTMUST00000020602.2	2405	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,993 bps Translation length: 131 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 01/10/2013 (Created on 27/02/2004)

Alternative symbols

RP23-414J20.3-002

Remarks

6330445P06Rik

Other assemblies

This transcript maps to 83,417,744-83,454,033 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000137512

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Snapc3-002 OTTMUST00000000100.2

Summary

Transcript-based displays