Transcript: Srsf1-006 OTTMUST00000093491.1

Description

serine/arginine-rich splicing factor 1

Location

Chromosome 11: 88,047,803-88,050,410 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000001473 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Srsf1-001	OTTMUST00000002908.2	5362	248aa	OTTMUSP00000001418	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS36273	Q6PDM2
Srsf1-003	OTTMUST00000002910.3	2948	201aa	OTTMUSP00000052830	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS36274	-
Srsf1-006	OTTMUST00000093491.1	1209	253aa	OTTMUSP00000051863	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BX95
Srsf1-002	OTTMUST00000002909.4	896	106aa	OTTMUSP00000034281	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7AI47	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Srsf1-005	OTTMUST00000093492.1	401	58aa	OTTMUSP00000051864	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6QXN3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Srsf1-004	OTTMUST00000002911.1	759	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Srsf1-007	OTTMUST00000093501.1	645	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,209 bps Translation length: 253 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 25/06/2010)

Alternative symbols

RP23-199A2.2-006

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 88,047,803-88,050,410 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000191711 ENSMUST00000107920

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Srsf1-006 OTTMUST00000093491.1

Summary

Transcript-based displays