Transcript: Srsf2-003 OTTMUST00000103653.2

Description

splicing factor, arginine/serine-rich 2 (SC-35)

Location

About this transcript

This transcript has 3 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Srsf2-001	OTTMUST00000008306.2	1899	221aa	OTTMUSP00000004038	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS25680	Q62093
Srsf2-002	OTTMUST00000008307.3	1336	221aa	OTTMUSP00000036119	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS25680	Q62093
Srsf2-003	OTTMUST00000103653.2	620	19aa	OTTMUSP00000057933	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BJA4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Srsf2-005	OTTMUST00000111227.1	433	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Srsf2-004	OTTMUST00000111226.1	1814	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 620 bps Translation length: 19 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 02/06/2011)

Alternative symbols

RP23-468A19.7-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 116,849,906-116,852,086 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000176834

Curation Method

Manual annotation from Havana