Transcript: Smek2-002 OTTMUST00000011853.2

Description

SMEK homolog 2, suppressor of mek1 (Dictyostelium)

Location

Chromosome 11: 29,173,747-29,188,350 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000005320 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Smek2-003	OTTMUST00000011854.1	5125	820aa	OTTMUSP00000005489	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24492	Q922R5
Smek2-001	OTTMUST00000011852.1	2410	616aa	OTTMUSP00000005487	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Smek2-002	OTTMUST00000011853.2	616	194aa	OTTMUSP00000005488	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5RJB9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Smek2-004	OTTMUST00000011855.2	576	192aa	OTTMUSP00000005490	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5M6W0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Smek2-006	OTTMUST00000011857.3	657	89aa	OTTMUSP00000063040	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	M0QW93	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Smek2-007	OTTMUST00000011858.1	827	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smek2-005	OTTMUST00000011856.1	611	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 4 Transcript length: 616 bps Translation length: 194 residues

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 21/08/2003)

Alternative symbols

RP23-393O10.1-002

Remarks

novel protein

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 29,173,747-29,188,350 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000156280

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Smek2-002 OTTMUST00000011853.2

Summary

Transcript-based displays