Transcript: Lrp1b-002 OTTMUST00000029306.2

Description

low density lipoprotein-related protein 1B (deleted in tumors)

Location

Chromosome 2: 40,595,534-40,702,800 reverse strand.

About this transcript

This transcript has 17 exons and is annotated with 67 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000012311 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lrp1b-001	OTTMUST00000029305.2	16294	4599aa	OTTMUSP00000013225	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q202
Lrp1b-002	OTTMUST00000029306.2	3796	798aa	OTTMUSP00000013226	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6YDG9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Lrp1b-005	OTTMUST00000029309.2	2911	63aa	OTTMUSP00000073447	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Lrp1b-009	OTTMUST00000140034.2	2586	781aa	OTTMUSP00000073445	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Lrp1b-010	OTTMUST00000140033.2	864	288aa	OTTMUSP00000073444	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SVE4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Lrp1b-008	OTTMUST00000140035.1	798	68aa	OTTMUSP00000073446	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Lrp1b-003	OTTMUST00000029307.2	2298	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Lrp1b-007	OTTMUST00000029311.2	4063	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lrp1b-006	OTTMUST00000029310.2	2557	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lrp1b-004	OTTMUST00000029308.1	740	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 17 Transcript length: 3,796 bps Translation length: 798 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 26/03/2015 (Created on 10/06/2005)

Alternative symbols

RP23-151M8.2-002

Remarks

9630004P12Rik

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 40,595,534-40,702,800 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000142546

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Lrp1b-002 OTTMUST00000029306.2

Summary

Transcript-based displays