Transcript: Pde1a-009 OTTMUST00000032229.3

Description

phosphodiesterase 1A, calmodulin-dependent

Location

Chromosome 2: 79,834,462-80,128,939 reverse strand.

About this transcript

This transcript has 16 exons and is annotated with 19 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000013315 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pde1a-001	OTTMUST00000032227.1	4258	545aa	OTTMUSP00000014326	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16172	Q8BRR9
Pde1a-002	OTTMUST00000032223.2	2439	545aa	OTTMUSP00000014325	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16172	Q8BRR9
Pde1a-003	OTTMUST00000032200.1	1673	465aa	OTTMUSP00000014311	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16174	Q5I7S8
Pde1a-005	OTTMUST00000032198.2	1646	456aa	OTTMUSP00000014309	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16173	Q9JLL9
Pde1a-006	OTTMUST00000032199.1	1661	420aa	OTTMUSP00000014310	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2ASF9
Pde1a-004	OTTMUST00000032221.2	1426	476aa	OTTMUSP00000014324	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6X0V1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Pde1a-009	OTTMUST00000032229.3	4178	545aa	OTTMUSP00000065549	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS16172	Q8BRR9
Pde1a-007	OTTMUST00000032222.1	1029	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pde1a-008	OTTMUST00000032228.1	869	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 16 Transcript length: 4,178 bps Translation length: 545 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16172

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 07/03/2013 (Created on 19/07/2005)

Alternative symbols

RP23-326J18.1-009

Other assemblies

This transcript maps to 79,834,462-80,128,939 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000183775

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pde1a-009 OTTMUST00000032229.3

Summary

Transcript-based displays