Transcript: Arhgef6-006 OTTMUST00000103946.2

Description

Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6

Location

Chromosome X: 57,248,987-57,326,599 reverse strand.

About this transcript

This transcript has 11 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000017820 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Arhgef6-001	OTTMUST00000043148.2	4569	795aa	OTTMUSP00000019411	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40984	F6WMJ3
Arhgef6-003	OTTMUST00000043150.1	1614	483aa	OTTMUSP00000019412	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2AFJ8
Arhgef6-006	OTTMUST00000103946.2	1604	302aa	OTTMUSP00000058123	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BJ53	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Arhgef6-008	OTTMUST00000103948.2	748	250aa	OTTMUSP00000058125	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Arhgef6-007	OTTMUST00000103949.1	675	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Arhgef6-002	OTTMUST00000043149.2	2951	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef6-004	OTTMUST00000043151.1	2696	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef6-005	OTTMUST00000043152.1	1301	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 1,604 bps Translation length: 302 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 10/06/2011)

Alternative symbols

RP23-372E6.1-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 57,248,987-57,326,599 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000176986

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Arhgef6-006 OTTMUST00000103946.2

Summary

Transcript-based displays