Transcript: Sema4f-004 OTTMUST00000141987.1

Description

sema domain immunoglobulin domain TM domain and short cytoplasmic domain

Location

About this transcript

This transcript has 7 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sema4f-001	OTTMUST00000050182.1	4086	777aa	OTTMUSP00000023388	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20264	Q9Z123
Sema4f-004	OTTMUST00000141987.1	771	29aa	OTTMUSP00000074126	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SUN0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sema4f-003	OTTMUST00000050184.1	345	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sema4f-002	OTTMUST00000050183.3	2907	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 771 bps Translation length: 29 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/06/2015 (Created on 01/06/2015)

Alternative symbols

RP23-238I17.1-004

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 82,918,601-82,939,545 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000203271

Curation Method

Manual annotation from Havana