Transcript: Ccl25-002 OTTMUST00000053635.1

Description

chemokine (C-C motif) ligand 25

Location

Chromosome 8: 4,349,588-4,360,020 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000022436 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ccl25-002	OTTMUST00000053635.1	1058	144aa	OTTMUSP00000025510	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22085	O35903
Ccl25-004	OTTMUST00000053637.2	867	228aa	OTTMUSP00000025512	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YWJ1
Ccl25-005	OTTMUST00000053638.2	823	134aa	OTTMUSP00000025513	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3V2F3
Ccl25-003	OTTMUST00000053636.2	395	119aa	OTTMUSP00000025511	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z470	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Ccl25-006	OTTMUST00000053639.2	485	146aa	OTTMUSP00000066690	Non stop decay	-	-
Ccl25-007	OTTMUST00000053640.2	1109	89aa	OTTMUSP00000066691	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Ccl25-001	OTTMUST00000053634.2	1061	53aa	OTTMUSP00000066689	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Ccl25-008	OTTMUST00000053641.2	362	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ccl25-009	OTTMUST00000146347.1	2549	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ccl25-010	OTTMUST00000146346.1	2461	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,058 bps Translation length: 144 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22085

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 03/12/2013 (Created on 17/01/2007)

Alternative symbols

AC155164.1-002

Other assemblies

This transcript maps to 4,349,588-4,360,020 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000024004

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Ccl25-002 OTTMUST00000053635.1

Summary

Transcript-based displays