Transcript: Ap2s1-005 OTTMUST00000142685.1

Description

adaptor-related protein complex 2, sigma 1 subunit

Location

About this transcript

This transcript has 6 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ap2s1-001	OTTMUST00000054420.2	836	142aa	OTTMUSP00000025971	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52042	Q3UJ76
Ap2s1-004	OTTMUST00000142684.1	372	92aa	OTTMUSP00000074417	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RQ06
Ap2s1-003	OTTMUST00000142683.1	752	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Ap2s1-005	OTTMUST00000142685.1	504	60aa	OTTMUSP00000074418	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RPS0
Ap2s1-006	OTTMUST00000142686.1	374	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ap2s1-002	OTTMUST00000054422.1	1054	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 504 bps Translation length: 60 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 17/06/2015 (Created on 17/06/2015)

Alternative symbols

AC148981.2-005

Other assemblies

This transcript maps to 16,738,472-16,748,934 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000205590

Curation Method

Manual annotation from Havana