Transcript: Ogfod1-001 OTTMUST00000056238.1

Description

2-oxoglutarate and iron-dependent oxygenase domain containing 1

Location

About this transcript

This transcript has 13 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ogfod1-001	OTTMUST00000056238.1	5310	545aa	OTTMUSP00000027002	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22535	Q3U0K8
Ogfod1-002	OTTMUST00000056239.1	5141	502aa	OTTMUSP00000027003	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52636	-
Ogfod1-004	OTTMUST00000056241.1	5214	530aa	OTTMUSP00000027004	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YTU2
Ogfod1-005	OTTMUST00000056242.2	844	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ogfod1-007	OTTMUST00000056244.1	718	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ogfod1-003	OTTMUST00000056240.1	671	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ogfod1-006	OTTMUST00000056243.1	594	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 5,310 bps Translation length: 545 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22535

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/01/2016 (Created on 19/02/2007)

Alternative symbols

AC138118.1-001

Other assemblies

This transcript maps to 94,037,198-94,067,921 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000109556

Curation Method

Manual annotation from Havana