Transcript: Gpn3-004 OTTMUST00000065927.2

Description

GPN-loop GTPase 3

Location

Chromosome 5: 122,373,985-122,382,299 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000026635 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Gpn3-001	OTTMUST00000065924.1	1592	284aa	OTTMUSP00000032924	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19647	Q9D3W4
Gpn3-006	OTTMUST00000065929.1	595	106aa	OTTMUSP00000032927	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Gpn3-002	OTTMUST00000065925.3	2198	189aa	OTTMUSP00000071572	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Gpn3-005	OTTMUST00000065928.2	809	32aa	OTTMUSP00000032926	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Gpn3-004	OTTMUST00000065927.2	781	113aa	OTTMUSP00000032925	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Gpn3-003	OTTMUST00000065926.2	500	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 781 bps Translation length: 113 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/10/2014 (Created on 12/07/2007)

Alternative symbols

AC113285.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 122,373,985-122,382,299 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000123537

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Gpn3-004 OTTMUST00000065927.2

Summary

Transcript-based displays