Transcript: Cldnd1-005 OTTMUST00000071205.2

Description

claudin domain containing 1

Location

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cldnd1-001	OTTMUST00000070621.2	2147	253aa	OTTMUSP00000036016	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS28234	Q9CQX5
Cldnd1-002	OTTMUST00000070681.1	1540	253aa	OTTMUSP00000036060	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS28234	Q9CQX5
Cldnd1-005	OTTMUST00000071205.2	491	123aa	OTTMUSP00000036434	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CY63	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cldnd1-003	OTTMUST00000070682.1	805	99aa	OTTMUSP00000036061	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CY66
Cldnd1-006	OTTMUST00000071206.1	581	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cldnd1-004	OTTMUST00000070683.1	597	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 491 bps Translation length: 123 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 21/09/2007)

Alternative symbols

RP23-366K13.1-005

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 58,728,048-58,731,379 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000162191

Curation Method

Manual annotation from Havana